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Author Kirill Sharshov

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Highly Pathogenic Avian Influenza A(H5N8) Virus Clade 2.3.4.4b, Western Siberia, Russia, 2020.

Ivan Sobolev, Kirill Sharshov, Nikita Dubovitskiy, Olga Kurskaya, Alexander Alekseev, Sergey Leonov, Yuriy Yushkov, Victor Irza, Andrey Komissarov, Artem Fadeev, Daria Danilenko, Junki Mine, Ryota Tsunekuni, Yuko Uchida, Takehiko Saito, Alexander Shestopalov,

Two variants of highly pathogenic avian influenza A(H5N8) virus were detected in dead poultry in Western Siberia, Russia, during August and September 2020. One variant was represented by viruses of clade 2.3.4.4b and the other by a novel reassortant between clade 2.3.4.4b and Eurasian low pathogenicity avian influenza viruses circulating ... Read more >>

Emerg Infect Dis (Emerging infectious diseases)
[2021, 27(8):2224-2227]

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Biological Properties and Genetic Characterization of Novel Low Pathogenic H7N3 Avian Influenza Viruses Isolated from Mallard Ducks in the Caspian Region, Dagestan, Russia.

Marina Gulyaeva, Maria Alessandra De Marco, Ganna Kovalenko, Eric Bortz, Tatiana Murashkina, Kseniya Yurchenko, Marzia Facchini, Mauro Delogu, Ivan Sobolev, Alimurad Gadzhiev, Kirill Sharshov, Alexander Shestopalov,

Avian influenza viruses (AIVs) are maintained in wild bird reservoirs, particularly in mallard ducks and other waterfowl. Novel evolutionary lineages of AIV that arise through genetic drift or reassortment can spread with wild bird migrations to new regions, infect a wide variety of resident bird species, and spillover to domestic ... Read more >>

Microorganisms (Microorganisms)
[2021, 9(4):]

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The Photosensitizer Octakis(cholinyl)zinc Phthalocyanine with Ability to Bind to a Model Spike Protein Leads to a Loss of SARS-CoV-2 Infectivity In Vitro When Exposed to Far-Red LED.

Kirill Sharshov, Mariya Solomatina, Olga Kurskaya, Ilya Kovalenko, Ekaterina Kholina, Vladimir Fedorov, Gennady Meerovich, Andrew Rubin, Marina Strakhovskaya,

Photodynamic inactivation of pathogenic microorganisms can be successfully used to eradicate pathogens in localized lesions, infected liquid media, and on various surfaces. This technique utilizes the photosensitizer (PS), light, and molecular oxygen to produce reactive oxygen species that kill pathogens. Here, we used the PS, water soluble octakis(cholinyl)zinc phthalocyanine (Zn-PcChol<sub>8+</sub>), ... Read more >>

Viruses (Viruses)
[2021, 13(4):]

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Dominant subtype switch in avian influenza viruses during 2016-2019 in China.

Yuhai Bi, Juan Li, Shanqin Li, Guanghua Fu, Tao Jin, Cheng Zhang, Yongchun Yang, Zhenghai Ma, Wenxia Tian, Jida Li, Shuqi Xiao, Liqiang Li, Renfu Yin, Yi Zhang, Lixin Wang, Yantao Qin, Zhongzi Yao, Fanyu Meng, Dongfang Hu, Delong Li, Gary Wong, Fei Liu, Na Lv, Liang Wang, Lifeng Fu, Yang Yang, Yun Peng, Jinmin Ma, Kirill Sharshov, Alexander Shestopalov, Marina Gulyaeva, George F Gao, Jianjun Chen, Yi Shi, William J Liu, Dong Chu, Yu Huang, Yingxia Liu, Lei Liu, Wenjun Liu, Quanjiao Chen, Weifeng Shi,

We have surveyed avian influenza virus (AIV) genomes from live poultry markets within China since 2014. Here we present a total of 16,091 samples that were collected from May 2016 to February 2019 in 23 provinces and municipalities in China. We identify 2048 AIV-positive samples and perform next generation sequencing. ... Read more >>

Nat Commun (Nature communications)
[2020, 11(1):5909]

Cited: 2 times

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Photocytotoxicity of white light-emitting diode irradiation on human lens epithelium and retinal pigment epithelium via the JNK and p38 MAPK signaling pathways.

Jiayin Song, Daoyong Li, Zhongshu Shan, Olga Kurskaya, Kirill Sharshov, Tingting Gao, Hongtao Bi,

WLEDs have lately been the preferred lighting device based on properties such as energy saving, high efficiency, longevity, and environmental protection. However, studies on the safety of white light-emitting diode (WLED) are limited. In our previous study, we found that WLED light (4000 K ± 500 K color temperature, 250 lx, and 20 min exposure) is ... Read more >>

J Photochem Photobiol B (Journal of photochemistry and photobiology. B, Biology)
[2020, 213:112058]

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Genesis and spread of multiple reassortants during the 2016/2017 H5 avian influenza epidemic in Eurasia.

Samantha J Lycett, Anne Pohlmann, Christoph Staubach, Valentina Caliendo, Mark Woolhouse, Martin Beer, Thijs Kuiken, ,

Highly pathogenic avian influenza (HPAI) viruses of the H5 A/goose/Guangdong/1/96 lineage can cause severe disease in poultry and wild birds, and occasionally in humans. In recent years, H5 HPAI viruses of this lineage infecting poultry in Asia have spilled over into wild birds and spread via bird migration to countries ... Read more >>

Proc Natl Acad Sci U S A (Proceedings of the National Academy of Sciences of the United States of America)
[2020, 117(34):20814-20825]

Cited: 8 times

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First de novo whole genome sequencing and assembly of the bar-headed goose.

Wen Wang, Fang Wang, Rongkai Hao, Aizhen Wang, Kirill Sharshov, Alexey Druzyaka, Zhuoma Lancuo, Yuetong Shi, Shuo Feng,

Background:The bar-headed goose (Anser indicus) mainly inhabits the plateau wetlands of Asia. As a specialized high-altitude species, bar-headed geese can migrate between South and Central Asia and annually fly twice over the Himalayan mountains along the central Asian flyway. The physiological, biochemical and behavioral adaptations of bar-headed geese to high-altitude ... Read more >>

PeerJ (PeerJ)
[2020, 8:e8914]

Cited: 1 time

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Experimental Infection of Adapted Influenza B Virus in Mice Model

Elena Prokopyeva, Olga Kurskaya, Ivan Sobolev, Mariia Solomatina, Tatyana Murashkina, Anastasia Suvorova, Alexander Alekseev, Daria Danilenko, Andrey Kommissarov, Artem Fadeev, Alexander Shestopalov, Alexander Dygai, Kirill Sharshov,

Over the years influenza B virus (IBV) contribute annual disease and can lead to serious respiratory disease among humans. More attention should be paid to the mammalian adaptive processes of B viruses and development of vaccines against current influenza. Because of preclinical trials of anti-influenza drugs are conducted mainly on ... Read more >>

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Characterization of the gut microbiome of black-necked cranes (Grus nigricollis) in six wintering areas in China.

Wen Wang, Fang Wang, Laixing Li, Aizhen Wang, Kirill Sharshov, Alexey Druzyaka, Zhuoma Lancuo, Shuoying Wang, Yuetong Shi,

The black-necked crane (Grus nigricollis) is a vulnerable species, breeding exclusively on the high-altitude wetlands of the Qinghai-Tibet Plateau. Bird species harbor diverse communities of microorganisms within their gastrointestinal tracts, which have important roles in the health, nutrition, and physiology of birds. Hitherto, virtually nothing was known about the gut ... Read more >>

Arch Microbiol (Archives of microbiology)
[2020, 202(5):983-993]

Cited: 3 times

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Immunostimulating effect of polysaccharides isolated from Ma-Nuo-Xi decoction in cyclophosphamide-immunosuppressed mice.

Duo Jie, Tingting Gao, Zhongshu Shan, Jiayin Song, Ming Zhang, Olga Kurskaya, Kirill Sharshov, Lixin Wei, Hongtao Bi,

Ma-Nuo-Xi Decoction (MNXD) is well-known in Tibetan medicine to be in line with the theory of treatment determination based on syndrome differentiation. However, the components responsible for its immunomodulating effect are unknown. In this study, three polysaccharide components-MNXD-P, MNXD-BD-P, and MNXD-AD-P-were isolated from MNXD and its basic and auxiliary prescription ... Read more >>

Int J Biol Macromol (International journal of biological macromolecules)
[2020, 146:45-52]

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Characterization of the microbiome along the gastrointestinal tracts of semi-artificially reared bar-headed geese (Anser indicus).

Wen Wang, Fang Wang, Aizhen Wang, Kirill Sharshov, Alexey Druzyaka, Zhuoma Lancuo, Shuoying Wang,

As one of the dominant waterfowl species of wetland areas in the Qinghai-Tibet Plateau, since 2003, artificial rearing of bar-headed geese (Anser indicus) has increased in several provinces of China for the purpose of conservation and economic development. In this study, we systematically characterized the microbial community diversity, compositions and ... Read more >>

Folia Microbiol (Praha) (Folia microbiologica)
[2020, 65(3):533-543]

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Tamdy Virus in Ixodid Ticks Infesting Bactrian Camels, Xinjiang, China, 2018.

Hong Zhou, Zhenghai Ma, Tao Hu, Yuhai Bi, Amutikari Mamuti, Runyuan Yu, Michael J Carr, Mang Shi, Juan Li, Kirill Sharshov, George F Gao, Weifeng Shi,

We isolated Tamdy virus (TAMV; strain XJ01/TAMV/China/2018) from Hyalomma asiaticum ticks infesting Bactrian camels in Xinjiang, China, in 2018. The genome of the strain showed high nucleotide similarity with previously described TAMV strains from Asia. Our study highlights the potential threat of TAMV to public health in China. ... Read more >>

Emerg Infect Dis (Emerging infectious diseases)
[2019, 25(11):2136-2138]

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Pathology of A(H5N8) (Clade 2.3.4.4) Virus in Experimentally Infected Chickens and Mice.

Elena A Prokopyeva, Vsevolod A Zinserling, You-Chan Bae, Yongkuk Kwon, Olga G Kurskaya, Ivan A Sobolev, Peter M Kozhin, Andrey Komissarov, Artem Fadeev, Vladimir Petrov, Alexander M Shestopalov, Kirill A Sharshov,

The emergence of novel highly pathogenic avian influenza viruses (HPAIVs) in migratory birds raises serious concerns as these viruses have the potential to spread during fall migration. We report the identification of novel HPAIV A(H5N8) clade 2.3.4.4 virus that was isolated from sick domestic duck at commercial farm during the ... Read more >>

Interdiscip Perspect Infect Dis (Interdisciplinary perspectives on infectious diseases)
[2019, 2019:4124865]

Cited: 5 times

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The Emergence of Avian Orthoavulavirus 13 in Wild Migratory Waterfowl in China Revealed the Existence of Diversified Trailer Region Sequences and HN Gene Lengths within this Serotype.

Yidong Fei, Xinxin Liu, Jiaqi Mu, Junjiao Li, Xibing Yu, Jin Chang, Yuhai Bi, Tobias Stoeger, Abdul Wajid, Denys Muzyka, Kirill Sharshov, Alexander Shestopalov, Alongkorn Amonsin, Jianjun Chen, Zhuang Ding, Renfu Yin,

<i>Avian orthoavulavirus 13</i> (AOAV-13), also named <i>avian paramyxovirus 13</i> (APMV-13), has been found sporadically in wild birds around the world ever since the discovery of AOAV-13 (AOAV-13/wild goose/Shimane/67/2000) in a wild goose from Japan in 2000. However, there are no reports of AOAV-13 in China. In the present study, a ... Read more >>

Viruses (Viruses)
[2019, 11(7):]

Cited: 2 times

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Isolation of highly pathogenic H5N6 avian influenza virus in Southern Vietnam with genetic similarity to those infecting humans in China.

Ryota Tsunekuni, Kasumi Sudo, Phuong Thanh Nguyen, Bach Duc Luu, Thai Duy Phuong, Tran Minh Tan, Tung Nguyen, Junki Mine, Momoko Nakayama, Taichiro Tanikawa, Kirill Sharshov, Nobuhiro Takemae, Takehiko Saito,

Since 2013, H5N6 highly pathogenic avian influenza viruses (HPAIVs) have been responsible for outbreaks in poultry and wild birds around Asia. H5N6 HPAIV is also a public concern due to sporadic human infections being reported in China. In the current study, we isolated an H5N6 HPAIV strain (A/Muscovy duck/Long An/AI470/2018; ... Read more >>

Transbound Emerg Dis (Transboundary and emerging diseases)
[2019, 66(6):2209-2217]

Cited: 3 times

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Genetics and pathogenicity of H5N6 highly pathogenic avian influenza viruses isolated from wild birds and a chicken in Japan during winter 2017-2018.

Junki Mine, Yuko Uchida, Momoko Nakayama, Taichiro Tanikawa, Ryota Tsunekuni, Kirill Sharshov, Nobuhiro Takemae, Ivan Sobolev, Alexander Shestpalov, Takehiko Saito,

An H5N6 highly pathogenic avian influenza virus (HPAIV) outbreak occurred in poultry in Japan during January 2018, and H5N6 HPAIVs killed several wild birds in 3 prefectures during Winter 2017-2018. Time-measured phylogenetic analyses demonstrated that the Hemagglutinin (HA) and internal genes of these isolates were genetically similar to clade 2.3.4.4.B ... Read more >>

Virology (Virology)
[2019, 533:1-11]

Cited: 4 times

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Phylogeographic evidence for the inter- and intracontinental dissemination of avian influenza viruses via migration flyways.

Junki Mine, Yuko Uchida, Kirill Sharshov, Ivan Sobolev, Alexander Shestopalov, Takehiko Saito,

Genetically related highly pathogenic avian influenza viruses (HPAIVs) of H5N6 subtype caused outbreaks simultaneously in East Asia and Europe-geographically distinct regions-during winter 2017-2018. This situation prompted us to consider whether the application of phylogeographic analysis to a particular gene segment of AIVs could provide clues for understanding how AIV had ... Read more >>

PLoS One (PloS one)
[2019, 14(6):e0218506]

Cited: 3 times

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Genetic characterization of an H2N2 influenza virus isolated from a muskrat in Western Siberia.

Marina Gulyaeva, Kirill Sharshov, Mizuho Suzuki, Ivan Sobolev, Yoshihiro Sakoda, Alexander Alekseev, Mariya Sivay, Lidia Shestopalova, Michael Shchelkanov, Alexander Shestopalov,

Thirty-two muskrats (Ondatra zibethicus) were captured for surveillance of avian influenza virus in wild waterfowl and mammals near Lake Chany, Western Siberia, Russia. A/muskrat/Russia/63/2014 (H2N2) was isolated from an apparently healthy muskrat using chicken embryos. Based on phylogenetic analysis, the hemagglutinin and neuraminidase genes of this isolate were classified into ... Read more >>

J Vet Med Sci (The Journal of veterinary medical science)
[2017, 79(8):1461-1465]

Cited: 2 times

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Composition, diversity and function of gastrointestinal microbiota in wild red-billed choughs (Pyrrhocorax pyrrhocorax).

Wen Wang, Aizhen Wang, Yongsheng Yang, Fang Wang, Yingbao Liu, Yuhui Zhang, Kirill Sharshov, Linsheng Gui,

Hitherto, virtually nothing is known about the microbial communities related to the bird species in the family Corvidae. To fill this gap, the present study was conducted to provide a baseline description of the gut microbiota of wild red-billed choughs (Pyrrhocorax pyrrhocorax). In this study, microbiota from four gastrointestinal locations ... Read more >>

Int Microbiol (International microbiology : the official journal of the Spanish Society for Microbiology)
[2019, 22(4):491-500]

Cited: 3 times

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Characterization of Avian-like Influenza A (H4N6) Virus Isolated from Caspian Seal in 2012.

Marina Gulyaeva, Ivan Sobolev, Kirill Sharshov, Olga Kurskaya, Alexander Alekseev, Lidia Shestopalova, Anna Kovner, Yuhai Bi, Weifeng Shi, Michael Shchelkanov, Alexander Shestopalov,

Virol Sin (Virologica Sinica)
[2018, 33(5):449-452]

Cited: 2 times

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Viral etiology of acute respiratory infections in hospitalized children in Novosibirsk City, Russia (2013 - 2017).

Olga Kurskaya, Tatyana Ryabichenko, Natalya Leonova, Weifeng Shi, Hongtao Bi, Kirill Sharshov, Eugenia Kazachkova, Ivan Sobolev, Elena Prokopyeva, Tatiana Kartseva, Alexander Alekseev, Alexander Shestopalov,

<h4>Background</h4>Acute respiratory infections (ARIs) cause a considerable morbidity and mortality worldwide especially in children. However, there are few studies of the etiological structure of ARIs in Russia. In this work, we analyzed the etiology of ARIs in children (0-15 years old) admitted to Novosibirsk Children's Municipal Clinical Hospital in 2013-2017.<h4>Methods</h4>We ... Read more >>

PLoS One (PloS one)
[2018, 13(9):e0200117]

Cited: 7 times

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Comparative metagenomics of the gut microbiota in wild greylag geese (Anser anser) and ruddy shelducks (Tadorna ferruginea).

Wen Wang, Sisi Zheng, Laixing Li, Yongsheng Yang, Yingbao Liu, Aizhen Wang, Kirill Sharshov, Yao Li,

Gut microbiome contributes to host health by maintaining homeostasis, increasing digestive efficiency, and facilitating the development of immune system. Wild greylag geese (Anser anser) and ruddy shelducks (Tadorna ferruginea), migrating along the central Asian flyway, appear to be one of the most popular species in the rare birds rearing industries ... Read more >>

Microbiologyopen (MicrobiologyOpen)
[2019, 8(5):e00725]

Cited: 3 times

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Viral etiology of Acute Respiratory Infections in Hospitalized Children in Novosibirsk City, Russia (2013 – 2017)

Olga Kurskaya, Tatyana Ryabichenko, Natalya Leonova, Weifeng Shi, Hongtao Bi, Kirill Sharshov, Eugenia Kazachkova, Ivan Sobolev, Elena Prokopyeva, Tatyana Kartseva, Alexander Alekseev, Alexander Shestopalov,

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Comparative analyses of the gut microbiota among three different wild geese species in the genus Anser.

Wen Wang, Yingbao Liu, Yongsheng Yang, Aizhen Wang, Kirill Sharshov, Yao Li, Mengyao Cao, Puzhen Mao, Laixing Li,

In this study, we characterized for the first time the gut microbiota of Greylag geese (Anser anser) using high-throughput 16S rRNA gene sequencing technology. The results showed that the phyla Firmicutes (78.55%), Fusobacteria (9.38%), Proteobacteria (7.55%), Bacteroidetes (1.82%), Cyanobacteria (1.44%), and Actinobacteria (0.61%) dominated the gut microbial communities in the ... Read more >>

J Basic Microbiol (Journal of basic microbiology)
[2018, 58(6):543-553]

Cited: 3 times

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CASCIRE surveillance network and work on avian influenza viruses.

Yuhai Bi, Weifeng Shi, Jianjun Chen, Quanjiao Chen, Zhenghai Ma, Gary Wong, Wenxia Tian, Renfu Yin, Guanghua Fu, Yongchun Yang, William J Liu, Chuansong Quan, Qianli Wang, Shenghu He, Xiangdong Li, Qianfeng Xia, Lixin Wang, Zhaohui Pan, Laixing Li, Hong Li, Wen Xu, Ying Luo, Hui Zeng, Lianpan Dai, Haixia Xiao, Kirill Sharshov, Alexander Shestopalov, Yi Shi, Jinghua Yan, Xuebing Li, Yingxia Liu, Fumin Lei, Wenjun Liu, George F Gao,

Sci China Life Sci (Science China. Life sciences)
[2017, 60(12):1386-1391]

Cited: 8 times

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